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Single Nucleotide Polymorphism

Single Nucleotide Polymorphism-related patent applications - as published by the U.S. Patent and Trademark Office (USPTO).


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Novel single nucleotide polymorphisms and community-associated methicillin-resistant staphylococcus aureus
November 02, 2017 - N°20170314065

The present invention is based on the discovery of novel polymorphisms (snps) in the penicillin binding protein (pbp3) gene in staphylococcus aureus. The presence of g88a and/or g2047a snps provides an accurate, reliable biomarker for the presence of methicillin resistant staphylococcus aureus (mrsa), specifically the community-associated mrsa (ca-mrsa). The present invention provides reagents used for detecting the ...
Computationally efficient correlation of genetic effects with function-valued traits
Microsoft Technology Licensing, Llc
October 05, 2017 - N°20170286593

This disclosure presents a model for identifying correlations in genome-wide association studies (gwas) with function-valued traits that provides increased power and computational efficiency by use of a gaussian process regression with radial basis function (rbf) kernels to model the function-valued traits and specialized factorizations to achieve speed. A gaussian process is assigned to each partition for each allele of a ...
Single nucleotide polymorphism (snp) markers for stevia
Purecircle Usa Inc.
October 05, 2017 - N°20170283819

Stevia varieties with high a content of rebd, a high content of rebm, and a high content of rebd and rebm containing various snp markers and ugt isoforms, are disclosed. Methods of screening for the snps are also disclosed as well as for using the snps in marker assisted breeding. Further provided are methods for introgressing the disclosed snps associated ...
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Cell population analysis using single nucleotide polymorphisms from single cell transcriptomes
Fred Hutchinson Cancer Research Center
September 14, 2017 - N°20170260584

The disclosure provides methods and systems for producing single cell rna sequencing data. Single nucleotide polymorphisms (snps) identified in such data can be used to distinguish subpopulations of cells within a mixed population.
Human identification using a panel of snps
Life Technologies Corporation
September 07, 2017 - N°20170253922

The present invention provides methods, compositions, kits, systems and apparatus that are useful for multiplex pcr of one or more nucleic acids which belong to a panel of single nucleotide polymorphisms (snps) useful to identify a human. In particular, various target-specific primers are provided that allow for the selective amplification of one or more target sequences in the panel. In ...
Methods and compositions for treating a subject with a smad7 antisense oligonucleotide
Nogra Pharma Limited
August 24, 2017 - N°20170240893

The present invention relates to treatment of inflammatory bowel disease (e. G., crohn's disease and ulcerative colitis) using antisense nucleotides that are directed against polymorphic forms (e. G., those containing single nucleotide polymorphisms) of the smad7 mrna. The invention thus relates to treatment methods for subjects having polymorphic forms of smad7 and antisense oligonucleotides that specifically target smad7 mrna transcripts ...
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Site-specific endonuclease guided rolling circle amplification
Simply Diagnostics Inc.
July 27, 2017 - N°20170211137

The disclosure provides methods and kits involving site-specific endonuclease guided rolling circle amplification (rca). Nucleic acid substrates, optionally generated by hybridizing a guidance primer to a single stranded nucleic acid, are cleaved with a site-specific endonuclease. In the presence of the target site, endonuclease cleavage of the substrate generates a nucleic acid having a free 3′-hydroxyl end, which is ...
Method of characterizing sequences from genetic material samples
The Translational Genomics Research Institute
July 20, 2017 - N°20170206311

Among other aspects provided herein is a method describing the use of single nucleotide polymorphism (snp) genotyping microarrays to resolve whether genetic material (such as genomic dna) derived from a particular individual is present in a genetic material mixture (such as a complex genomic dna mixture) is disclosed. Furthermore, it is demonstrated that the identification of the presence of genetic ...
Microrna polymorphisms conferring enhanced drought tolerance in a plant
Syngenta Participations Ag
July 20, 2017 - N°20170204476

Methods of identifying a single nucleotide polymorphism associated with a plant trait and methods of identifying a plant having an improved trait. The plant trait is correlated with at least one single nucleotide polymorphism in a microrna region of a plant genome. Isolated nucleic acids, transgenic plants, and methods of producing the same are also disclosed.
Bulk allele discrimination assay
General Mills, Inc.
July 20, 2017 - N°20170204474

A method is described for bulk allele discrimination of multiple single nucleotide polymorphisms in multiple individuals. Also described is a kit for use in performing a method for bulk allele discrimination of multiple single nucleotide polymorphisms in multiple individuals.
Method for predicting risk of ankylosing spondylitis using dna copy number variants
Catholic University Industry Academic Cooperation Foundation
July 20, 2017 - N°20170204463

The present invention relates to a method of predicting the risk of developing ankylosing spondylitis using dna copy number variation. It was verified that the risk of developing ankylosing spondylitis can be effectively predicted using primers for detecting dna copy number variation, of the present invention, and the sensitivity and specificity of prediction can be improved by grafting the results ...
Method for prediction of fetal monogenic genetic variations using maternal serum dna
Sk Telecom Co., Ltd.
July 13, 2017 - N°20170198348

The present invention provides a method for non-invasively detecting, expecting, or diagnosing fetal single nucleotide polymorphisms and the resultant monogenic disorders, through maternal cell-free dna sequencing. The diagnosis method according to the present invention does not harm mothers or fetuses and is convenient, in that analysis is possible using maternal blood samples; and can be favorably used for a prenatal ...
Method of double allele specific pcr for snp microarray
Phalanx Biotech Group, Inc.
June 29, 2017 - N°20170183729

The present invention provides a method of double allele specific polymerase chain reaction (pcr) for single nucleotide polymorphism (snp) microarray, the method provides the allele specific site as the 3′ teiiiiinal nucleotide of forward and reverse primers, it does not require a primer having specific nucleotides. The method of the present invention is easily to design the primer based on ...
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Analytical methods for cell free nucleic acids and applications
Centre National De La Recherche Scientifique (cnrs)
June 15, 2017 - N°20170166982

The present invention is directed to an in vitro method of detecting cell free nucleic acids, preferably cell free dna (cfdna) in a body fluid sample from an individual or a patient, wherein the method comprises the step of accurately and sensitively determining the concentration of cell free nucleic acid in the sample and/or determining the concentration or amount ...
Methods of using single nucleotide polymorphisms in the tl1a gene to predict or diagnose ...
Cedars-sinai Medical Center
June 15, 2017 - N°20170166967

This invention provides methods of diagnosing or predicting susceptibility to inflammatory bowel disease by determining the presence or absence of genetic variants in the tl1a gene. In one embodiment, a method of the invention is practiced by determining the presence or absence of tl1a production following fc-gamma-r activation. In another embodiment, the invention provides methods of treatment of ...
Canine autoimmune conditions and diagnosis and treatment thereof
The Translational Genomics Research Institute
June 15, 2017 - N°20170166964

The disclosure includes methods of identifying a dog at risk of developing a an autoimmune disease or condition, for example a hypothyroid disease or condition, comprising testing whether the dog exhibits one or more selected single nucleotide polymorphisms (snps), together with diagnostic kits for carrying out such methods, methods of treatment or prophylaxis of such autoimmune disease or condition, e. ...
Amplified isothermal detection of polynucleotides with atp release
The Board Of Trustees Of The Leland Stanford Junior University
June 08, 2017 - N°20170159112

The presence of a target polynucleotide sequence of interest, including targets comprising genetic variations or a single nucleotide polymorphism, is detected by a dna polymerization reaction, where the reaction mixture includes mixtures of nucleotides including at least one chimeric nucleoside tetraphosphate dimer atp-linked nucleotide (arn), in which atp is the leaving group. Dna synthesis with arns is shown to be ...
Unheated extraction of genomic dna in an automated laboratory system
True Health Ip Llc
June 08, 2017 - N°20170159107

A method for analyzing genomic dna includes introducing a plurality of samples comprising human cells into individual vessels in each of a plurality of multi-vessel well plates. At least a subset of the human cells in the plurality of samples is lysed without the use of heat. Dna in the at least a subset of lysed human cells is isolated ...
Genetic markers for myb28
Plant Bioscience Limited
May 18, 2017 - N°20170137897

The present invention relates to a method for determining the genotype of a cruciferous vegetable plant for a plant with an increased glucosinolate level, comprising obtaining a sample of nucleic acids from said plant or a portion thereof and detecting in said nucleic acids a polymorphism at the myb28 locus that is genetically linked to an increased glucosinolate level. The ...
Oligonucleotides and methods for detecting kras and pik3ca mutations
Siemens Healthcare Diagnostics Inc.
May 18, 2017 - N°20170137894

Provided are oligonucleotides that are capable of detecting kras and pik3ca mutations in both cancer patients and healthy individuals with high specificity in kpcr assays. When the oligonucleotides are used as forward primers in conjunction with a defined genotyping algorithm spreadsheet, the primers are capable of enhancing detection of kras codon 12, 13, and 61 and pik3ca codon 542, 545, and 1047 single nucleotide ...
Strategies for high throughput identification and detection of polymorphisms
Keygene N.v.
May 18, 2017 - N°20170137872

The invention relates to a method for the high throughput identification of single nucleotide polymorphisms by performing a complexity reduction on two or more samples to yield two or more libraries, sequencing at least part of the libraries, aligning the identified sequences and determining any putative single nucleotide polymorphisms, confirming any putative single nucleotide polymorphism, generating detection probes for the ...
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